Entry Detail



General Information

Database ID:BRCA05230
Cancer Type:breast cancer
Dataset:GSE55807
CTCs/CTM Isolation Method:CTC-iChip



Gene Information

ncRNA Symbol:TAF11
Full Name:TATA-box binding protein associated factor 11
Category:mRNA
Synonyms:MGC:15243|PRO2134|TAF2I|TAFII28
Chromosome:chr6
Strand:-
Coordinate:
Start Site(bp):34877778End Site(bp):34888089
Gene Summary:Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a small subunit of TFIID that is present in all TFIID complexes and interacts with TBP. This subunit also interacts with another small subunit, TAF13, to form a heterodimer with a structure similar to the histone core structure. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2012]
External Links:
Ensembl ID:ENSG00000064995
HGNC ID:HGNC:11544
Entrez Gene:6882



Expression Profile of TAF11 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
NO
YES
YES
hsa-miR-205-5p
YES
YES
NO
hsa-miR-218-5p
NO
YES
YES
hsa-miR-221-3p
YES
YES
NO
hsa-miR-222-3p
YES
YES
NO
hsa-miR-29a-3p
YES
YES
YES
hsa-miR-29b-3p
YES
YES
YES
hsa-miR-29c-3p
YES
YES
YES
hsa-miR-339-5p
YES
YES
NO
hsa-miR-361-5p
YES
YES
NO
hsa-miR-365a-3p
YES
YES
NO
hsa-miR-382-5p
YES
YES
NO
hsa-miR-542-3p
YES
YES
NO
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