ctcRbase

Entry Detail

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General Information

Database ID: BRCA05425 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SH3BP4 Full Name: SH3 domain binding protein 4 Category: mRNA Synonyms: BOG25|TTP Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 234951973 End Site(bp): 235055714 Gene Summary: This gene encodes a protein with 3 Asn-Pro-Phe (NPF) motifs, an SH3 domain, a PXXP motif, a bipartite nuclear targeting signal, and a tyrosine phosphorylation site. This protein is involved in cargo-specific control of clathrin-mediated endocytosis, specifically controlling the internalization of a specific protein receptor. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000130147 HGNC ID: HGNC:10826 Entrez Gene: 23677

Expression Profile of SH3BP4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-154-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-217 YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-25-3p YES YES NO hsa-miR-299-5p YES NO YES hsa-miR-32-5p YES YES NO hsa-miR-326 YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-330-5p YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-421 YES YES YES hsa-miR-448 YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO hsa-miR-9-5p YES NO YES Display: