ctcRbase

Entry Detail

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General Information

Database ID: BRCA05591 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: FNTA Full Name: farnesyltransferase, CAAX box, alpha Category: mRNA Synonyms: FPTA|PGGT1A|PTAR2 Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 43034194 End Site(bp): 43085788 Gene Summary: Prenyltransferases can attach either a farnesyl group or a geranylgeranyl group in thioether linkage to the cysteine residue of proteins with a C-terminal CAAX box. CAAX geranylgeranyltransferase and CAAX farnesyltransferase are heterodimers that share the same alpha subunit but have different beta subunits. This gene encodes the alpha subunit of these transferases. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 11 and 13. [provided by RefSeq, May 2010] External Links: Ensembl ID: ENSG00000168522 HGNC ID: HGNC:3782 Entrez Gene: 2339

Expression Profile of FNTA Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-107 YES NO NO hsa-miR-1271-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-451a YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-708-5p YES YES NO hsa-miR-96-5p YES YES NO Display: