ctcRbase

Entry Detail

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General Information

Database ID: BRCA05641 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SLU7 Full Name: SLU7 homolog, splicing factor Category: mRNA Synonyms: 9G8|hSlu7 Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 160401641 End Site(bp): 160421711 Gene Summary: Pre-mRNA splicing occurs in two sequential transesterification steps. The protein encoded by this gene is a splicing factor that has been found to be essential during the second catalytic step in the pre-mRNA splicing process. It associates with the spliceosome and contains a zinc knuckle motif that is found in other splicing factors and is involved in protein-nucleic acid and protein-protein interactions. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000164609 HGNC ID: HGNC:16939 Entrez Gene: 10569

Expression Profile of SLU7 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-143-3p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-342-3p YES YES NO hsa-miR-433-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-876-5p YES YES NO Display: