ctcRbase

Entry Detail

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General Information

Database ID: BRCA05716 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CHTOP Full Name: chromatin target of PRMT1 Category: mRNA Synonyms: C10orf77|C1orf77|FL-SRAG|FOP|SRAG|SRAG-3|SRAG-5|pp7704 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 153633982 End Site(bp): 153646306 Gene Summary: This gene encodes a small nuclear protein that is characterized by an arginine and glycine rich region. This protein may have an important role in the regulation of fetal globin gene expression and in the activation of estrogen-responsive genes. A recent study reported that this protein binds 5-hydroxymethylcytosine (5hmC) and associates with an arginine methyltransferase complex (methylosome), which promotes methylation of arginine 3 of histone H4 (H4R3) and activation of genes involved in glioblastomagenesis. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Nov 2015] External Links: Ensembl ID: ENSG00000160679 HGNC ID: HGNC:24511 Entrez Gene: 26097

Expression Profile of CHTOP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p NO YES YES hsa-miR-107 NO YES YES hsa-miR-128-3p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-154-5p YES YES NO hsa-miR-25-3p NO YES YES hsa-miR-296-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-32-5p NO YES YES hsa-miR-329-3p YES YES NO hsa-miR-338-3p YES YES YES hsa-miR-361-5p NO YES YES hsa-miR-362-3p YES YES NO hsa-miR-363-3p NO YES YES hsa-miR-367-3p NO YES YES hsa-miR-381-3p YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-92a-3p NO YES YES hsa-miR-92b-3p NO YES YES Display: