ctcRbase

Entry Detail

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General Information

Database ID: BRCA05741 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SEC62 Full Name: SEC62 homolog, preprotein translocation factor Category: mRNA Synonyms: Dtrp1|HTP1|TLOC1|TP-1 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 169966635 End Site(bp): 169998373 Gene Summary: The Sec61 complex is the central component of the protein translocation apparatus of the endoplasmic reticulum (ER) membrane. The protein encoded by this gene and SEC63 protein are found to be associated with ribosome-free SEC61 complex. It is speculated that Sec61-Sec62-Sec63 may perform post-translational protein translocation into the ER. The Sec61-Sec62-Sec63 complex might also perform the backward transport of ER proteins that are subject to the ubiquitin-proteasome-dependent degradation pathway. The encoded protein is an integral membrane protein located in the rough ER. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000008952 HGNC ID: HGNC:11846 Entrez Gene: 7095

Expression Profile of SEC62 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-1271-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES NO YES hsa-miR-134-5p YES YES YES hsa-miR-1-3p YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-186-5p YES NO YES hsa-miR-206 YES YES YES hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-212-3p YES NO YES hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-302a-3p YES NO YES hsa-miR-302b-3p YES NO YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES NO YES hsa-miR-302e YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-330-3p YES NO YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES NO YES hsa-miR-369-3p YES NO YES hsa-miR-372-3p YES NO YES hsa-miR-373-3p YES NO YES hsa-miR-376c-3p YES YES YES hsa-miR-384 YES NO YES hsa-miR-409-3p YES NO YES hsa-miR-448 YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-520a-3p YES NO YES hsa-miR-520b YES NO YES hsa-miR-520c-3p YES NO YES hsa-miR-520d-3p YES NO YES hsa-miR-520e YES NO YES hsa-miR-613 YES YES YES hsa-miR-655-3p YES NO YES hsa-miR-876-5p YES YES YES hsa-miR-96-5p YES YES YES Display: