ctcRbase

Entry Detail

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General Information

Database ID: BRCA05786 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: ARID1B Full Name: AT-rich interaction domain 1B Category: mRNA Synonyms: 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 156777374 End Site(bp): 157210779 Gene Summary: This locus encodes an AT-rich DNA interacting domain-containing protein. The encoded protein is a component of the SWI/SNF chromatin remodeling complex and may play a role in cell-cycle activation. The protein encoded by this locus is similar to AT-rich interactive domain-containing protein 1A. These two proteins function as alternative, mutually exclusive ARID-subunits of the SWI/SNF complex. The associated complexes play opposing roles. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2016] External Links: Ensembl ID: ENSG00000049618 HGNC ID: HGNC:18040 Entrez Gene: 57492

Expression Profile of ARID1B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p NO YES YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-142-5p YES NO YES hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-219a-2-3p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-329-3p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-342-3p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-520f-3p YES NO YES hsa-miR-599 YES YES NO hsa-miR-875-5p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-9-5p YES YES YES Display: