ctcRbase

Entry Detail

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General Information

Database ID: BRCA05795 Cancer Type: breast cancer Dataset: GSE75367 CTCs/CTM Isolation Method: micromanipulation immunofluorescence

Gene Information

ncRNA Symbol: GPBP1 Full Name: GC-rich promoter binding protein 1 Category: mRNA Synonyms: GPBP|SSH6|VASCULIN Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 57173948 End Site(bp): 57264679 Gene Summary: This gene was originally isolated by subtractive hybridization of cDNAs expressed in atherosclerotic plaques with a thrombus, and was found to be expressed only in vascular smooth muscle cells. However, a shorter splice variant was found to be more ubiquitously expressed. This protein is suggested to play a role in the development of atherosclerosis. Studies in mice suggest that it may also function as a GC-rich promoter-specific trans-activating transcription factor. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Feb 2011] External Links: Ensembl ID: ENSG00000062194 HGNC ID: HGNC:29520 Entrez Gene: 65056

Expression Profile of GPBP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130a-3p NO YES YES hsa-miR-130b-3p NO YES YES hsa-miR-143-3p YES YES NO hsa-miR-145-5p NO YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-194-5p NO YES YES hsa-miR-208a-3p NO YES YES hsa-miR-208b-3p NO YES YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES YES YES hsa-miR-221-3p NO YES YES hsa-miR-222-3p NO YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-301a-3p NO YES YES hsa-miR-301b-3p NO YES YES hsa-miR-320a NO YES YES hsa-miR-320b NO YES YES hsa-miR-320c NO YES YES hsa-miR-320d NO YES YES hsa-miR-323a-3p YES NO YES hsa-miR-377-3p YES YES NO hsa-miR-383-5p NO YES YES hsa-miR-384 YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-454-3p NO YES YES hsa-miR-499a-5p NO YES YES hsa-miR-543 NO YES YES hsa-miR-7-5p NO YES YES hsa-miR-873-5p NO YES YES hsa-miR-876-5p NO YES YES Display: