Entry Detail



General Information

Database ID:BRCA05817
Cancer Type:breast cancer
Dataset:GSE109761
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:SF3B4
Full Name:splicing factor 3b subunit 4
Category:mRNA
Synonyms:AFD1|Hsh49|SAP49|SF3b49
Chromosome:chr1
Strand:-
Coordinate:
Start Site(bp):149923317End Site(bp):149928344
Gene Summary:This gene encodes one of four subunits of the splicing factor 3B. The protein encoded by this gene cross-links to a region in the pre-mRNA immediately upstream of the branchpoint sequence in pre-mRNA in the prespliceosomal complex A. It also may be involved in the assembly of the B, C and E spliceosomal complexes. In addition to RNA-binding activity, this protein interacts directly and highly specifically with subunit 2 of the splicing factor 3B. This protein contains two N-terminal RNA-recognition motifs (RRMs), consistent with the observation that it binds directly to pre-mRNA. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000143368
HGNC ID:HGNC:10771
Entrez Gene:10262



Expression Profile of SF3B4 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-133a-3p
YES
YES
YES
hsa-miR-133b
YES
YES
YES
hsa-miR-194-5p
YES
YES
NO
hsa-miR-28-5p
YES
YES
NO
hsa-miR-488-3p
YES
YES
NO
hsa-miR-708-5p
YES
YES
NO
hsa-miR-875-5p
YES
YES
NO
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