ctcRbase

Entry Detail

---



General Information

Database ID: BRCA05831 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: KDM5B Full Name: lysine demethylase 5B Category: mRNA Synonyms: CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 202724491 End Site(bp): 202809470 Gene Summary: This gene encodes a lysine-specific histone demethylase that belongs to the jumonji/ARID domain-containing family of histone demethylases. The encoded protein is capable of demethylating tri-, di- and monomethylated lysine 4 of histone H3. This protein plays a role in the transcriptional repression or certain tumor suppressor genes and is upregulated in certain cancer cells. This protein may also play a role in genome stability and DNA repair. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Nov 2016] External Links: Ensembl ID: ENSG00000117139 HGNC ID: HGNC:18039 Entrez Gene: 10765

Expression Profile of KDM5B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-137 YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-155-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-194-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-339-5p YES YES NO hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-376c-3p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-486-5p YES YES YES hsa-miR-490-3p YES YES NO hsa-miR-491-5p YES YES YES hsa-miR-495-3p YES YES YES hsa-miR-519d-3p YES YES NO hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES YES hsa-miR-590-5p YES YES NO hsa-miR-599 YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-93-5p YES YES NO Display: