ctcRbase

Entry Detail

---



General Information

Database ID: BRCA06045 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: PRPF3 Full Name: pre-mRNA processing factor 3 Category: mRNA Synonyms: HPRP3|HPRP3P|PRP3|Prp3p|RP18|SNRNP90 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 150321476 End Site(bp): 150353195 Gene Summary: The removal of introns from nuclear pre-mRNAs occurs on complexes called spliceosomes, which are made up of 4 small nuclear ribonucleoprotein (snRNP) particles and an undefined number of transiently associated splicing factors. This gene product is one of several proteins that associate with U4 and U6 snRNPs. Mutations in this gene are associated with retinitis pigmentosa-18. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000117360 HGNC ID: HGNC:17348 Entrez Gene: 9129

Expression Profile of PRPF3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-218-5p NO YES YES hsa-miR-338-3p NO YES YES hsa-miR-377-3p YES YES NO hsa-miR-96-5p YES YES NO Display: