ctcRbase

Entry Detail

---



General Information

Database ID: BRCA06165 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SNX17 Full Name: sorting nexin 17 Category: mRNA Synonyms: - Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 27370496 End Site(bp): 27377533 Gene Summary: This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members, but contains a B41 domain. This protein interacts with the cytoplasmic domain of P-selectin, and may function in the intracellular trafficking of P-selectin. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, May 2012] External Links: Ensembl ID: ENSG00000115234 HGNC ID: HGNC:14979 Entrez Gene: 9784

Expression Profile of SNX17 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-182-5p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-331-3p YES NO YES hsa-miR-96-5p YES NO YES Display: