ctcRbase

Entry Detail

---



General Information

Database ID: BRCA06284 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SHISA5 Full Name: shisa family member 5 Category: mRNA Synonyms: SCOTIN Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 48467798 End Site(bp): 48504826 Gene Summary: This gene encodes a member of the shisa family. The encoded protein is localized to the endoplasmic reticulum, and together with p53 induces apoptosis in a caspase-dependent manner. Alternative splicing results in multiple transcript variants. Related pseudogenes of this gene are found on chromosome X. [provided by RefSeq, Apr 2016] External Links: Ensembl ID: ENSG00000164054 HGNC ID: HGNC:30376 Entrez Gene: 51246

Expression Profile of SHISA5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-138-5p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-147a YES NO NO hsa-miR-15a-5p YES NO NO hsa-miR-15b-5p YES NO NO hsa-miR-16-5p YES NO NO hsa-miR-195-5p YES NO NO hsa-miR-200a-3p YES YES YES hsa-miR-25-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-32-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-424-5p YES NO NO hsa-miR-448 YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES NO NO hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO hsa-miR-9-5p YES NO YES Display: