Entry Detail



General Information

Database ID:BRCA06390
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:SHMT2
Full Name:serine hydroxymethyltransferase 2
Category:mRNA
Synonyms:GLYA|HEL-S-51e|SHMT
Chromosome:chr12
Strand:+
Coordinate:
Start Site(bp):57229327End Site(bp):57234935
Gene Summary:This gene encodes the mitochondrial form of a pyridoxal phosphate-dependent enzyme that catalyzes the reversible reaction of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. The encoded product is primarily responsible for glycine synthesis. The activity of the encoded protein has been suggested to be the primary source of intracellular glycine. The gene which encodes the cytosolic form of this enzyme is located on chromosome 17. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]
External Links:
Ensembl ID:ENSG00000182199
HGNC ID:HGNC:10852
Entrez Gene:6472



Expression Profile of SHMT2 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-149-5p
YES
YES
YES
hsa-miR-193a-3p
YES
YES
NO
hsa-miR-193b-3p
YES
YES
NO
hsa-miR-383-5p
YES
YES
YES
hsa-miR-485-5p
YES
YES
YES
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