Entry Detail



General Information

Database ID:BRCA06542
Cancer Type:breast cancer
Dataset:GSE75367
CTCs/CTM Isolation Method:micromanipulation immunofluorescence



Gene Information

ncRNA Symbol:SELENOK
Full Name:selenoprotein K
Category:mRNA
Synonyms:HSPC030|HSPC297|SELK
Chromosome:chr3
Strand:-
Coordinate:
Start Site(bp):53884410End Site(bp):53891988
Gene Summary:The protein encoded by this gene belongs to the selenoprotein K family. It is a transmembrane protein that is localized in the endoplasmic reticulum (ER), and is involved in ER-associated degradation (ERAD) of misfolded, glycosylated proteins. It also has a role in the protection of cells from ER stress-induced apoptosis. Knockout studies in mice show the importance of this gene in promoting Ca(2+) flux in immune cells and mounting effective immune response. This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec). Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Pseudogenes of this locus have been identified on chromosomes 6 and 19.[provided by RefSeq, Aug 2017]
External Links:
Ensembl ID:ENSG00000113811
HGNC ID:HGNC:30394
Entrez Gene:58515



Expression Profile of SELENOK Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-142-5p
YES
NO
YES
hsa-miR-181a-5p
YES
YES
YES
hsa-miR-181b-5p
YES
YES
YES
hsa-miR-181c-5p
YES
YES
YES
hsa-miR-181d-5p
YES
YES
YES
hsa-miR-200b-3p
YES
YES
YES
hsa-miR-200c-3p
YES
YES
YES
hsa-miR-217
YES
NO
YES
hsa-miR-300
YES
YES
YES
hsa-miR-340-5p
YES
YES
YES
hsa-miR-381-3p
YES
YES
YES
hsa-miR-429
YES
YES
YES
hsa-miR-655-3p
YES
NO
YES
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