Entry Detail



General Information

Database ID:BRCA06568
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:SNRNP200
Full Name:small nuclear ribonucleoprotein U5 subunit 200
Category:mRNA
Synonyms:ASCC3L1|BRR2|HELIC2|RP33|U5-200KD
Chromosome:chr2
Strand:-
Coordinate:
Start Site(bp):96274336End Site(bp):96305515
Gene Summary:Pre-mRNA splicing is catalyzed by the spliceosome, a complex of specialized RNA and protein subunits that removes introns from a transcribed pre-mRNA segment. The spliceosome consists of small nuclear RNA proteins (snRNPs) U1, U2, U4, U5 and U6, together with approximately 80 conserved proteins. U5 snRNP contains nine specific proteins. This gene encodes one of the U5 snRNP-specific proteins. This protein belongs to the DEXH-box family of putative RNA helicases. It is a core component of U4/U6-U5 snRNPs and appears to catalyze an ATP-dependent unwinding of U4/U6 RNA duplices. Mutations in this gene cause autosomal-dominant retinitis pigmentosa. Alternatively spliced transcript variants encoding different isoforms have been found, but the full-length nature of these variants has not been determined. [provided by RefSeq, Mar 2010]
External Links:
Ensembl ID:ENSG00000144028
HGNC ID:HGNC:30859
Entrez Gene:23020



Expression Profile of SNRNP200 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-370-3p
YES
YES
NO
hsa-miR-425-5p
YES
YES
NO
hsa-miR-873-5p
YES
YES
NO
Display: