ctcRbase

Entry Detail

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General Information

Database ID: BRCA06604 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: PXDN Full Name: peroxidasin Category: mRNA Synonyms: ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 1631887 End Site(bp): 1744852 Gene Summary: This gene encodes a heme-containing peroxidase that is secreted into the extracellular matrix. It is involved in extracellular matrix formation, and may function in the physiological and pathological fibrogenic response in fibrotic kidney. Mutations in this gene cause corneal opacification and other ocular anomalies, and also microphthalmia and anterior segment dysgenesis. [provided by RefSeq, Aug 2014] External Links: Ensembl ID: ENSG00000130508 HGNC ID: HGNC:14966 Entrez Gene: 7837

Expression Profile of PXDN Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-342-3p YES YES NO hsa-miR-377-3p YES YES YES hsa-miR-448 YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-488-3p YES YES YES hsa-miR-519d-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-98-5p YES NO YES Display: