ctcRbase

Entry Detail

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General Information

Database ID: BRCA06632 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SNF8 Full Name: SNF8, ESCRT-II complex subunit Category: mRNA Synonyms: Dot3|EAP30|VPS22 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 48929316 End Site(bp): 48945117 Gene Summary: The protein encoded by this gene is a component of the endosomal sorting complex required for transport II (ESCRT-II), which regulates the movement of ubiquitinylated transmembrane proteins to the lysosome for degradation. This complex also interacts with the RNA polymerase II elongation factor (ELL) to overcome the repressive effects of ELL on RNA polymerase II activity. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015] External Links: Ensembl ID: ENSG00000159210 HGNC ID: HGNC:17028 Entrez Gene: 11267

Expression Profile of SNF8 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-370-3p YES NO YES hsa-miR-506-3p YES YES NO Display: