ctcRbase

Entry Detail

---



General Information

Database ID: BRCA06958 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RCN2 Full Name: reticulocalbin 2 Category: mRNA Synonyms: E6BP|ERC-55|ERC55|TCBP49 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 76931619 End Site(bp): 76954392 Gene Summary: The protein encoded by this gene is a calcium-binding protein located in the lumen of the ER. The protein contains six conserved regions with similarity to a high affinity Ca(+2)-binding motif, the EF-hand. This gene maps to the same region as type 4 Bardet-Biedl syndrome, suggesting a possible causative role for this gene in the disorder. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2012] External Links: Ensembl ID: ENSG00000117906 HGNC ID: HGNC:9935 Entrez Gene: 5955

Expression Profile of RCN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-136-5p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-197-3p YES YES NO hsa-miR-223-3p YES YES YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-340-5p YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-495-3p NO YES YES hsa-miR-496 YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-543 YES YES NO Display: