ctcRbase

Entry Detail

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General Information

Database ID: BRCA07026 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: APTX Full Name: aprataxin Category: mRNA Synonyms: AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 32972606 End Site(bp): 33025168 Gene Summary: This gene encodes a member of the histidine triad (HIT) superfamily. The encoded protein may play a role in single-stranded DNA repair through its nucleotide-binding activity and its diadenosine polyphosphate hydrolase activity. Mutations in this gene have been associated with ataxia-ocular apraxia. Alternatively spliced transcript variants have been identified for this gene.[provided by RefSeq, Aug 2010] External Links: Ensembl ID: ENSG00000137074 HGNC ID: HGNC:15984 Entrez Gene: 54840

Expression Profile of APTX Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-16-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-214-3p YES NO NO hsa-miR-22-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-424-5p YES NO NO hsa-miR-494-3p YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-873-5p YES YES NO Display: