ctcRbase

Entry Detail

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General Information

Database ID: BRCA07064 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CHMP5 Full Name: charged multivesicular body protein 5 Category: mRNA Synonyms: C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 33264879 End Site(bp): 33282069 Gene Summary: CHMP5 belongs to the chromatin-modifying protein/charged multivesicular body protein (CHMP) family. These proteins are components of ESCRT-III (endosomal sorting complex required for transport III), a complex involved in degradation of surface receptor proteins and formation of endocytic multivesicular bodies (MVBs). Some CHMPs have both nuclear and cytoplasmic/vesicular distributions, and one such CHMP, CHMP1A (MIM 164010), is required for both MVB formation and regulation of cell cycle progression (Tsang et al., 2006 [PubMed 16730941]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000086065 HGNC ID: HGNC:26942 Entrez Gene: 51510

Expression Profile of CHMP5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-142-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-384 YES YES YES hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES YES hsa-miR-496 YES YES YES Display: