ctcRbase

Entry Detail

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General Information

Database ID: BRCA07635 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SOX12 Full Name: SRY-box 12 Category: mRNA Synonyms: SOX22 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 325595 End Site(bp): 330224 Gene Summary: Members of the SOX family of transcription factors are characterized by the presence of a DNA-binding high mobility group (HMG) domain, homologous to the HMG box of sex-determining region Y (SRY). Forming a subgroup of the HMG domain superfamily, SOX proteins have been implicated in cell fate decisions in a diverse range of developmental processes. SOX transcription factors have diverse tissue-specific expression patterns during early development and have been proposed to act as target-specific transcription factors and/or as chromatin structure regulatory elements. The protein encoded by this gene was identified as a SOX family member based on conserved domains, and its expression in various tissues suggests a role in both differentiation and maintenance of several cell types. [provided by RefSeq, Jan 2013] External Links: Ensembl ID: ENSG00000177732 HGNC ID: HGNC:11198 Entrez Gene: 6666

Expression Profile of SOX12 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-138-5p YES NO YES hsa-miR-140-3p YES NO YES hsa-miR-150-5p YES YES NO hsa-miR-151a-5p YES NO YES hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-196a-5p YES NO YES hsa-miR-196b-5p YES NO YES hsa-miR-19a-3p YES NO YES hsa-miR-19b-3p YES NO YES hsa-miR-296-3p YES YES NO hsa-miR-296-5p YES NO YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-326 YES YES YES hsa-miR-330-5p YES YES YES hsa-miR-346 YES NO YES hsa-miR-370-3p YES YES YES hsa-miR-375 YES NO YES hsa-miR-423-5p YES NO YES hsa-miR-455-3p YES NO YES hsa-miR-486-5p YES NO YES hsa-miR-489-3p YES NO YES hsa-miR-663a YES NO NO hsa-miR-744-5p YES NO YES hsa-miR-874-3p YES NO YES Display: