ctcRbase

Entry Detail

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General Information

Database ID: BRCA07643 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: VBP1 Full Name: VHL binding protein 1 Category: mRNA Synonyms: HIBBJ46|PFD3|PFDN3|VBP-1 Chromosome: chrX Strand: + Coordinate: Start Site(bp): 155197007 End Site(bp): 155239817 Gene Summary: The protein encoded by this gene interacts with the Von Hippel-Lindau protein to form an intracellular complex. The encoded protein functions as a chaperone protein, and may play a role in the transport of the Von Hippel-Lindau protein from the perinuclear granules to the nucleus or cytoplasm. Alternative splicing and the use of alternate transcription start sites results in multiple transcript variants encoding different protein isoforms. [provided by RefSeq, Jan 2015] External Links: Ensembl ID: ENSG00000155959 HGNC ID: HGNC:12662 Entrez Gene: 7411

Expression Profile of VBP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-144-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-483-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-543 YES YES NO Display: