ctcRbase

Entry Detail

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General Information

Database ID: BRCA07719 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: IFIT1 Full Name: interferon induced protein with tetratricopeptide repeats 1 Category: mRNA Synonyms: C56|G10P1|IFI-56|IFI-56K|IFI56|IFIT-1|IFNAI1|ISG56|P56|RNM561 Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 89392546 End Site(bp): 89406486 Gene Summary: This gene encodes a protein containing tetratricopeptide repeats that was originally identified as induced upon treatment with interferon. The encoded protein may inhibit viral replication and translational initiation. This gene is located in a cluster on chromosome 10 with five other closely related genes. There is a pseudogene for this gene on chromosome 13. Alternatively spliced transcript variants encoding multiple isoforms have been observed. [provided by RefSeq, Aug 2012] External Links: Ensembl ID: ENSG00000185745 HGNC ID: HGNC:5407 Entrez Gene: 3434

Expression Profile of IFIT1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106b-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-653-5p YES YES NO Display: