ctcRbase

Entry Detail

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General Information

Database ID: BRCA07828 Cancer Type: breast cancer Dataset: GSE75367 CTCs/CTM Isolation Method: micromanipulation immunofluorescence

Gene Information

ncRNA Symbol: EPB41 Full Name: erythrocyte membrane protein band 4.1 Category: mRNA Synonyms: 4.1R|EL1|HE Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 28887091 End Site(bp): 29120046 Gene Summary: The protein encoded by this gene, together with spectrin and actin, constitute the red cell membrane cytoskeletal network. This complex plays a critical role in erythrocyte shape and deformability. Mutations in this gene are associated with type 1 elliptocytosis (EL1). Alternatively spliced transcript variants encoding different isoforms have been described for this gene.[provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000159023 HGNC ID: HGNC:3377 Entrez Gene: 2035

Expression Profile of EPB41 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-132-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-149-5p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-205-5p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-361-5p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-381-3p YES YES YES hsa-miR-431-5p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-543 YES YES YES hsa-miR-655-3p YES NO YES hsa-miR-760 YES NO YES Display: