ctcRbase

Entry Detail

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General Information

Database ID: BRCA08046 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SMUG1 Full Name: single-strand-selective monofunctional uracil-DNA glycosylase 1 Category: mRNA Synonyms: FDG|HMUDG|UNG3 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 54121277 End Site(bp): 54189008 Gene Summary: This gene encodes a protein that participates in base excision repair by removing uracil from single- and double-stranded DNA. Many alternatively spliced transcript variants exist for this gene; the full-length nature is known for some but not all of the variants. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000123415 HGNC ID: HGNC:17148 Entrez Gene: 23583

Expression Profile of SMUG1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-150-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-365a-3p NO YES YES hsa-miR-421 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-98-5p YES YES YES Display: