ctcRbase

Entry Detail

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General Information

Database ID: BRCA09292 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SLC12A2 Full Name: solute carrier family 12 member 2 Category: mRNA Synonyms: BSC|BSC2|NKCC1|PPP1R141 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 128083766 End Site(bp): 128189688 Gene Summary: The protein encoded by this gene mediates sodium and chloride transport and reabsorption. The encoded protein is a membrane protein and is important in maintaining proper ionic balance and cell volume. This protein is phosphorylated in response to DNA damage. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jan 2012] External Links: Ensembl ID: ENSG00000064651 HGNC ID: HGNC:10911 Entrez Gene: 6558

Expression Profile of SLC12A2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-137 YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-25-3p YES NO YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-32-5p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-361-5p YES YES NO hsa-miR-363-3p YES NO YES hsa-miR-367-3p YES NO YES hsa-miR-377-3p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-448 YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES YES hsa-miR-599 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-92a-3p YES NO YES hsa-miR-92b-3p YES NO YES hsa-miR-96-5p YES YES NO Display: