ctcRbase

Entry Detail

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General Information

Database ID: BRCA09359 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: KDM5C Full Name: lysine demethylase 5C Category: mRNA Synonyms: DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 Chromosome: chrX Strand: - Coordinate: Start Site(bp): 53191321 End Site(bp): 53225422 Gene Summary: This gene is a member of the SMCY homolog family and encodes a protein with one ARID domain, one JmjC domain, one JmjN domain and two PHD-type zinc fingers. The DNA-binding motifs suggest this protein is involved in the regulation of transcription and chromatin remodeling. Mutations in this gene have been associated with X-linked cognitive disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009] External Links: Ensembl ID: ENSG00000126012 HGNC ID: HGNC:11114 Entrez Gene: 8242

Expression Profile of KDM5C Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1224-5p YES NO YES hsa-miR-1321 YES NO NO hsa-miR-132-3p YES YES NO hsa-miR-138-5p YES NO YES hsa-miR-1-3p YES NO YES hsa-miR-142-3p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-193a-3p YES YES YES hsa-miR-193b-3p YES YES YES hsa-miR-204-5p YES YES NO hsa-miR-206 YES NO YES hsa-miR-211-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-28-5p YES NO YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-326 YES NO YES hsa-miR-329-3p YES YES YES hsa-miR-330-5p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-362-3p YES YES YES hsa-miR-362-5p YES NO YES hsa-miR-448 YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-613 YES NO YES hsa-miR-665 YES NO YES hsa-miR-708-5p YES NO YES hsa-miR-877-5p YES NO YES Display: