ctcRbase

Entry Detail

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General Information

Database ID: BRCA09778 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: PAFAH1B2 Full Name: platelet activating factor acetylhydrolase 1b catalytic subunit 2 Category: mRNA Synonyms: HEL-S-303 Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 117144267 End Site(bp): 117176894 Gene Summary: Platelet-activating factor acetylhydrolase (PAFAH) inactivates platelet-activating factor (PAF) into acetate and LYSO-PAF. This gene encodes the beta subunit of PAFAH, the other subunits are alpha and gamma. Multiple alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Jan 2014] External Links: Ensembl ID: ENSG00000168092 HGNC ID: HGNC:8575 Entrez Gene: 5049

Expression Profile of PAFAH1B2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-137 NO YES YES hsa-miR-140-5p NO YES YES hsa-miR-141-3p NO YES NO hsa-miR-142-3p YES NO YES hsa-miR-143-3p YES YES NO hsa-miR-145-5p NO YES YES hsa-miR-15a-5p NO YES YES hsa-miR-15b-5p NO YES YES hsa-miR-16-5p NO YES YES hsa-miR-17-5p YES YES YES hsa-miR-181a-5p NO YES YES hsa-miR-181b-5p NO YES YES hsa-miR-181c-5p NO YES YES hsa-miR-181d-5p NO YES YES hsa-miR-182-5p NO YES YES hsa-miR-186-5p YES YES NO hsa-miR-195-5p NO YES YES hsa-miR-200a-3p NO YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-22-3p NO YES YES hsa-miR-28-3p YES NO YES hsa-miR-28-5p NO YES YES hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30c-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-375 YES YES NO hsa-miR-424-5p NO YES YES hsa-miR-425-5p YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-497-5p NO YES YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-543 YES YES YES hsa-miR-665 YES NO YES hsa-miR-708-5p NO YES YES hsa-miR-873-5p NO YES YES hsa-miR-93-5p YES YES YES Display: