ctcRbase

Entry Detail

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General Information

Database ID: BRCA10008 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: COLGALT1 Full Name: collagen beta(1-O)galactosyltransferase 1 Category: mRNA Synonyms: ColGalT 1|GLT25D1 Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 17555594 End Site(bp): 17583162 Gene Summary: The protein encoded by this gene is one of two enzymes that transfers galactose moieties to hydroxylysine residues of collagen and mannose binding lectin. This gene is constitutively expressed and encodes a soluble protein that localizes to the endoplasmic reticulum. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000130309 HGNC ID: HGNC:26182 Entrez Gene: 79709

Expression Profile of COLGALT1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-136-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-155-5p YES YES YES hsa-miR-181b-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-873-5p YES YES NO Display: