ctcRbase

Entry Detail

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General Information

Database ID: BRCA10782 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TPCN1 Full Name: two pore segment channel 1 Category: mRNA Synonyms: TPC1 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 113221050 End Site(bp): 113298585 Gene Summary: Voltage-gated Ca(2+) and Na+ channels have 4 homologous domains, each containing 6 transmembrane segments, S1 to S6. TPCN1 is similar to these channels, but it has only 2 domains containing S1 to S6 (Ishibashi et al., 2000 [PubMed 10753632]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000186815 HGNC ID: HGNC:18182 Entrez Gene: 53373

Expression Profile of TPCN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 YES NO YES hsa-miR-153-3p YES YES YES hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-25-3p YES NO YES hsa-miR-32-5p YES NO YES hsa-miR-363-3p YES NO YES hsa-miR-367-3p YES NO YES hsa-miR-429 YES NO YES hsa-miR-448 NO YES YES hsa-miR-92a-3p YES NO YES hsa-miR-92b-3p YES NO YES Display: