ctcRbase

Entry Detail

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General Information

Database ID: BRCA12194 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SLC39A13 Full Name: solute carrier family 39 member 13 Category: mRNA Synonyms: EDSSPD3|LZT-Hs9|SCDEDS|ZIP13 Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 47407132 End Site(bp): 47416501 Gene Summary: This gene encodes a member of the LIV-1 subfamily of the ZIP transporter family. The encoded transmembrane protein functions as a zinc transporter. Mutations in this gene have been associated with the spondylocheiro dysplastic form of Ehlers-Danlos syndrome. Alternate transcript variants have been found for this gene. [provided by RefSeq, Jan 2016] External Links: Ensembl ID: ENSG00000165915 HGNC ID: HGNC:20859 Entrez Gene: 91252

Expression Profile of SLC39A13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES YES hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-137 YES YES YES hsa-miR-191-5p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-28-5p YES YES NO hsa-miR-29a-3p NO YES YES hsa-miR-29b-3p NO YES YES hsa-miR-29c-3p NO YES YES hsa-miR-455-5p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-9-5p YES NO YES Display: