Entry Detail



General Information

Database ID:BRCA12334
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:SHH
Full Name:sonic hedgehog signaling molecule
Category:mRNA
Synonyms:HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS
Chromosome:chr7
Strand:-
Coordinate:
Start Site(bp):155799986End Site(bp):155812273
Gene Summary:This gene encodes a protein that is instrumental in patterning the early embryo. It has been implicated as the key inductive signal in patterning of the ventral neural tube, the anterior-posterior limb axis, and the ventral somites. Of three human proteins showing sequence and functional similarity to the sonic hedgehog protein of Drosophila, this protein is the most similar. The protein is made as a precursor that is autocatalytically cleaved; the N-terminal portion is soluble and contains the signalling activity while the C-terminal portion is involved in precursor processing. More importantly, the C-terminal product covalently attaches a cholesterol moiety to the N-terminal product, restricting the N-terminal product to the cell surface and preventing it from freely diffusing throughout the developing embryo. Defects in this protein or in its signalling pathway are a cause of holoprosencephaly (HPE), a disorder in which the developing forebrain fails to correctly separate into right and left hemispheres. HPE is manifested by facial deformities. It is also thought that mutations in this gene or in its signalling pathway may be responsible for VACTERL syndrome, which is characterized by vertebral defects, anal atresia, tracheoesophageal fistula with esophageal atresia, radial and renal dysplasia, cardiac anomalies, and limb abnormalities. Additionally, mutations in a long range enhancer located approximately 1 megabase upstream of this gene disrupt limb patterning and can result in preaxial polydactyly. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000164690
HGNC ID:HGNC:10848
Entrez Gene:6469



Expression Profile of SHH Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A