Entry Detail



General Information

Database ID:BRCA12641
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:RRBP1
Full Name:ribosome binding protein 1
Category:mRNA
Synonyms:ES/130|ES130|RRp|hES
Chromosome:chr20
Strand:-
Coordinate:
Start Site(bp):17613678End Site(bp):17682295
Gene Summary:This gene encodes a ribosome-binding protein of the endoplasmic reticulum (ER) membrane. Studies suggest that this gene plays a role in ER proliferation, secretory pathways and secretory cell differentiation, and mediation of ER-microtubule interactions. Alternative splicing has been observed and protein isoforms are characterized by regions of N-terminal decapeptide and C-terminal heptad repeats. Splicing of the tandem repeats results in variations in ribosome-binding affinity and secretory function. The full-length nature of variants which differ in repeat length has not been determined. Pseudogenes of this gene have been identified on chromosomes 3 and 7, and RRBP1 has been excluded as a candidate gene in the cause of Alagille syndrome, the result of a mutation in a nearby gene on chromosome 20p12. [provided by RefSeq, Apr 2012]
External Links:
Ensembl ID:ENSG00000125844
HGNC ID:HGNC:10448
Entrez Gene:6238



Expression Profile of RRBP1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-124-3p
YES
YES
YES
hsa-miR-135a-5p
YES
YES
YES
hsa-miR-135b-5p
YES
YES
YES
hsa-miR-1-3p
YES
YES
YES
hsa-miR-206
YES
YES
YES
hsa-miR-223-3p
YES
YES
NO
hsa-miR-25-3p
YES
YES
YES
hsa-miR-32-5p
YES
YES
YES
hsa-miR-363-3p
YES
YES
YES
hsa-miR-367-3p
YES
YES
YES
hsa-miR-506-3p
YES
YES
YES
hsa-miR-542-3p
YES
YES
NO
hsa-miR-613
YES
YES
YES
hsa-miR-802
YES
NO
YES
hsa-miR-92a-3p
YES
YES
YES
hsa-miR-92b-3p
YES
YES
YES
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