Entry Detail



General Information

Database ID:BRCA12688
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:SYNJ2BP-COX16
Full Name:SYNJ2BP-COX16 readthrough
Category:mRNA
Synonyms:-
Chromosome:chr14
Strand:-
Coordinate:
Start Site(bp):70326064End Site(bp):70417074
Gene Summary:This locus represents naturally occurring read-through transcription between the neighboring SYNJ2BP (synaptojanin 2 binding protein) and COX16 (COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)) genes on chromosome 14. The read-through transcript produces a fusion protein that shares sequence identity with each individual gene product. Alternate splicing results in multiple transcript variants that encode different isoforms. [provided by RefSeq, Feb 2011]
External Links:
Ensembl ID:ENSG00000258644
HGNC ID:HGNC:48350
Entrez Gene:100529257



Expression Profile of SYNJ2BP-COX16 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-145-5p
YES
YES
NO
hsa-miR-23a-3p
YES
YES
YES
hsa-miR-23b-3p
YES
YES
YES
hsa-miR-486-5p
YES
YES
NO
Display: