ctcRbase

Entry Detail

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General Information

Database ID: BRCA13005 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: H1F0 Full Name: H1 histone family member 0 Category: mRNA Synonyms: H10|H1FV Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 37805093 End Site(bp): 37807436 Gene Summary: Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-independent histone that is a member of the histone H1 family. [provided by RefSeq, Oct 2015] External Links: Ensembl ID: ENSG00000189060 HGNC ID: HGNC:4714 Entrez Gene: 3005

Expression Profile of H1F0 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES NO YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-150-5p YES NO YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-204-5p YES YES NO hsa-miR-205-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-421 YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-532-3p YES NO YES hsa-miR-599 YES YES NO Display: