ctcRbase

Entry Detail

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General Information

Database ID: BRCA13820 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: ZFP90 Full Name: ZFP90 zinc finger protein Category: mRNA Synonyms: FIK|NK10|ZNF756|zfp-90 Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 68530090 End Site(bp): 68576072 Gene Summary: This gene encodes a member of the zinc finger protein family that modulates gene expression. The encoded protein derepresses the transcription of certain fetal cardiac genes and may contribute to the genetic reprogramming that occurs during the development of heart failure. Genome wide association studies have identified this gene among ulcerative colitis risk loci. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Mar 2015] External Links: Ensembl ID: ENSG00000184939 HGNC ID: HGNC:23329 Entrez Gene: 146198

Expression Profile of ZFP90 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-139-5p YES YES NO hsa-miR-140-5p YES YES NO hsa-miR-147a YES NO NO hsa-miR-153-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES YES NO Display: