ctcRbase

Entry Detail

---



General Information

Database ID: BRCA14029 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: OPN3 Full Name: opsin 3 Category: mRNA Synonyms: ECPN|PPP1R116 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 241590102 End Site(bp): 241677376 Gene Summary: Opsins are members of the guanine nucleotide-binding protein (G protein)-coupled receptor superfamily. In addition to the visual opsins, mammals possess several photoreceptive non-visual opsins that are expressed in extraocular tissues. This gene, opsin 3, is strongly expressed in brain and testis and weakly expressed in liver, placenta, heart, lung, skeletal muscle, kidney, and pancreas. The gene may also be expressed in the retina. The protein has the canonical features of a photoreceptive opsin protein. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000054277 HGNC ID: HGNC:14007 Entrez Gene: 23596

Expression Profile of OPN3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-370-3p YES YES YES hsa-miR-376c-3p YES YES YES hsa-miR-377-3p YES YES YES hsa-miR-383-5p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-876-5p YES YES NO Display: