ctcRbase

Entry Detail

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General Information

Database ID: BRCA14721 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RDX Full Name: radixin Category: mRNA Synonyms: DFNB24 Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 110174880 End Site(bp): 110296722 Gene Summary: Radixin is a cytoskeletal protein that may be important in linking actin to the plasma membrane. It is highly similar in sequence to both ezrin and moesin. The radixin gene has been localized by fluorescence in situ hybridization to 11q23. A truncated version representing a pseudogene (RDXP2) was assigned to Xp21.3. Another pseudogene that seemed to lack introns (RDXP1) was mapped to 11p by Southern and PCR analyses. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012] External Links: Ensembl ID: ENSG00000137710 HGNC ID: HGNC:9944 Entrez Gene: 5962

Expression Profile of RDX Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-136-5p YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-183-5p YES YES NO hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-301a-3p YES NO YES hsa-miR-301b-3p YES NO YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-31-5p YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-340-5p YES YES NO hsa-miR-346 YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-374b-5p YES YES NO hsa-miR-377-3p YES YES YES hsa-miR-409-3p YES NO YES hsa-miR-410-3p YES YES YES hsa-miR-421 YES YES YES hsa-miR-429 YES YES NO hsa-miR-454-3p YES NO YES hsa-miR-485-5p YES YES NO hsa-miR-487b-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-590-5p YES YES YES hsa-miR-653-5p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-708-5p YES YES NO hsa-miR-96-5p YES NO YES hsa-miR-98-5p YES YES YES Display: