ctcRbase

Entry Detail

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General Information

Database ID: BRCA14940 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TCF12 Full Name: transcription factor 12 Category: mRNA Synonyms: CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 56918623 End Site(bp): 57299281 Gene Summary: The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000140262 HGNC ID: HGNC:11623 Entrez Gene: 6938

Expression Profile of TCF12 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-139-5p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES YES NO hsa-miR-149-5p YES YES YES hsa-miR-154-5p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-185-5p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-204-5p YES YES NO hsa-miR-208a-3p YES YES YES hsa-miR-208b-3p YES YES YES hsa-miR-211-5p YES YES NO hsa-miR-217 YES NO YES hsa-miR-218-5p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-375 YES YES YES hsa-miR-377-3p YES YES YES hsa-miR-378a-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-431-5p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-542-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-599 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-7-5p YES YES YES hsa-miR-875-5p YES YES NO Display: