ctcRbase

Entry Detail

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General Information

Database ID: BRCA15368 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: ZKSCAN1 Full Name: zinc finger with KRAB and SCAN domains 1 Category: mRNA Synonyms: KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 100015572 End Site(bp): 100041689 Gene Summary: This gene encodes a member of the Kruppel C2H2-type zinc-finger family of proteins. This encoded protein may function as a transcription factor that regulates the expression of GABA type-A receptors in the brain. Transcripts from this gene have been shown to form stable and abundant circular RNAs. Elevated expression of this gene has been observed in gastric cancer and the encoded protein may stimulate migration and invasion of human gastric cancer cells. [provided by RefSeq, Oct 2016] External Links: Ensembl ID: ENSG00000106261 HGNC ID: HGNC:13101 Entrez Gene: 7586

Expression Profile of ZKSCAN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-134-5p YES YES NO hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES NO YES hsa-miR-144-3p YES YES NO hsa-miR-151a-3p YES NO YES hsa-miR-155-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-181a-5p YES NO YES hsa-miR-181b-5p YES NO YES hsa-miR-181c-5p YES NO YES hsa-miR-181d-5p YES NO YES hsa-miR-185-5p YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-200a-3p YES NO YES hsa-miR-205-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-371a-5p YES YES YES hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-520f-3p YES NO YES hsa-miR-532-5p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-625-5p YES NO NO hsa-miR-876-5p YES YES NO hsa-miR-9-5p YES YES YES Display: