ctcRbase

Entry Detail

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General Information

Database ID: BRCA15925 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SYS1-DBNDD2 Full Name: SYS1-DBNDD2 readthrough (NMD candidate) Category: mRNA Synonyms: C20orf169-DBNDD2 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 45363200 End Site(bp): 45410610 Gene Summary: This locus represents naturally occurring read-through transcription from the neighboring SYS1 Golgi-localized integral membrane protein homolog and dysbindin domain containing 2 (DBNDD2) genes. The read-through transcript includes the majority of exons from each individual gene, but it would be subject to nonsense-mediated mRNA decay (NMD) and is therefore predicted to be non-coding. [provided by RefSeq, Oct 2010] External Links: Ensembl ID: ENSG00000254806 HGNC ID: HGNC:33535 Entrez Gene: 767557

Expression Profile of SYS1-DBNDD2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-22-3p YES NO YES hsa-miR-24-3p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-760 YES NO YES Display: