ctcRbase

Entry Detail

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General Information

Database ID: BRCA16179 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: KPNA4 Full Name: karyopherin subunit alpha 4 Category: mRNA Synonyms: IPOA3|QIP1|SRP3 Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 160494995 End Site(bp): 160565588 Gene Summary: The nuclear import of karyophilic proteins is directed by short amino acid sequences termed nuclear localization signals (NLSs). Karyopherins, or importins, are cytoplasmic proteins that recognize NLSs and dock NLS-containing proteins to the nuclear pore complex. The protein encoded by this gene shares the sequence similarity with Xenopus importin-alpha and Saccharomyces cerevisiae Srp1. This protein is found to interact with the NLSs of DNA helicase Q1 and SV40 T antigen. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000186432 HGNC ID: HGNC:6397 Entrez Gene: 3840

Expression Profile of KPNA4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-103a-3p YES NO NO hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES NO NO hsa-miR-124-3p YES YES YES hsa-miR-129-2-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-1298-5p YES NO YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-149-5p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-153-3p YES NO YES hsa-miR-154-5p YES YES NO hsa-miR-155-5p YES NO YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-17-5p YES NO YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES NO NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-190a-5p YES YES YES hsa-miR-190b YES YES YES hsa-miR-192-5p YES NO YES hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-199a-5p YES YES YES hsa-miR-199b-5p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-214-3p YES NO NO hsa-miR-215-5p YES NO YES hsa-miR-217 YES NO YES hsa-miR-224-5p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-24-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-346 YES NO YES hsa-miR-361-5p YES NO YES hsa-miR-371a-5p YES YES YES hsa-miR-376a-3p YES NO YES hsa-miR-376b-3p YES NO YES hsa-miR-377-3p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-384 YES NO YES hsa-miR-409-3p YES NO YES hsa-miR-421 YES NO YES hsa-miR-424-5p YES YES YES hsa-miR-433-3p YES YES NO hsa-miR-448 YES NO YES hsa-miR-452-5p YES NO YES hsa-miR-483-3p YES NO YES hsa-miR-490-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-501-3p YES NO YES hsa-miR-502-3p YES NO YES hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES NO YES hsa-miR-543 YES YES YES hsa-miR-668-3p YES NO YES hsa-miR-760 YES NO YES hsa-miR-876-5p YES YES YES hsa-miR-93-5p YES NO YES hsa-miR-98-5p YES YES YES Display: