ctcRbase

Entry Detail

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General Information

Database ID: BRCA16326 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: USP47 Full Name: ubiquitin specific peptidase 47 Category: mRNA Synonyms: TRFP Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 11841423 End Site(bp): 11959323 Gene Summary: NA External Links: Ensembl ID: ENSG00000170242 HGNC ID: HGNC:20076 Entrez Gene: 55031

Expression Profile of USP47 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-101-3p YES YES YES hsa-miR-103a-3p YES NO YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES NO YES hsa-miR-128-3p YES YES NO hsa-miR-129-5p YES YES YES hsa-miR-1298-5p YES NO YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-138-5p YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-152-3p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-188-5p YES NO YES hsa-miR-200a-3p YES YES NO hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-204-5p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-219a-2-3p YES NO YES hsa-miR-22-3p YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-370-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-409-5p YES NO YES hsa-miR-421 YES YES YES hsa-miR-429 YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-455-3p YES NO YES hsa-miR-455-5p YES YES YES hsa-miR-485-5p YES NO YES hsa-miR-494-3p YES YES YES hsa-miR-505-3p YES YES YES hsa-miR-519d-3p YES YES YES hsa-miR-582-5p YES NO YES hsa-miR-655-3p YES NO YES hsa-miR-93-5p YES YES YES hsa-miR-98-5p YES NO YES Display: