ctcRbase

Entry Detail

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General Information

Database ID: BRCA16601 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SLC35C1 Full Name: solute carrier family 35 member C1 Category: mRNA Synonyms: CDG2C|FUCT1 Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 45804072 End Site(bp): 45813015 Gene Summary: This gene encodes a GDP-fucose transporter that is found in the Golgi apparatus. Mutations in this gene result in congenital disorder of glycosylation type IIc. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2009] External Links: Ensembl ID: ENSG00000181830 HGNC ID: HGNC:20197 Entrez Gene: 55343

Expression Profile of SLC35C1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-218-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-96-5p YES NO YES hsa-miR-98-5p YES YES NO Display: