ctcRbase

Entry Detail

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General Information

Database ID: BRCA16793 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SH3RF1 Full Name: SH3 domain containing ring finger 1 Category: mRNA Synonyms: POSH|RNF142|SH3MD2 Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 169094256 End Site(bp): 169271105 Gene Summary: This gene encodes a protein containing an N-terminus RING-finger, four SH3 domains, and a region implicated in binding of the Rho GTPase Rac. Via the RING-finger, the encoded protein has been shown to function as an ubiquitin-protein ligase involved in protein sorting at the trans-Golgi network. The encoded protein may also act as a scaffold for the c-Jun N-terminal kinase signaling pathway, facilitating the formation of a functional signaling module. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000154447 HGNC ID: HGNC:17650 Entrez Gene: 57630

Expression Profile of SH3RF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-128-3p YES YES YES hsa-miR-129-2-3p YES NO YES hsa-miR-1297 YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-206 YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-218-5p YES NO YES hsa-miR-223-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-425-5p YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-599 YES YES NO hsa-miR-613 YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-942-5p YES NO NO Display: