ctcRbase

Entry Detail

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General Information

Database ID: BRCA17117 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SLC31A1 Full Name: solute carrier family 31 member 1 Category: mRNA Synonyms: COPT1|CTR1 Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 113221562 End Site(bp): 113264492 Gene Summary: The protein encoded by this gene is a high-affinity copper transporter found in the cell membrane. The encoded protein functions as a homotrimer to effect the uptake of dietary copper. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000136868 HGNC ID: HGNC:11016 Entrez Gene: 1317

Expression Profile of SLC31A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-124-3p YES NO YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-132-3p YES YES YES hsa-miR-147a YES NO NO hsa-miR-182-5p YES YES NO hsa-miR-193a-3p YES YES YES hsa-miR-193b-3p YES YES YES hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-28-5p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-31-5p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-375 YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-429 YES NO YES hsa-miR-505-3p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES YES hsa-miR-590-5p YES YES NO hsa-miR-665 YES NO YES hsa-miR-708-5p YES YES YES hsa-miR-874-3p YES NO YES hsa-miR-98-5p YES YES YES Display: