ctcRbase

Entry Detail

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General Information

Database ID: BRCA17460 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: KDM6A Full Name: lysine demethylase 6A Category: mRNA Synonyms: KABUK2|UTX|bA386N14.2 Chromosome: chrX Strand: + Coordinate: Start Site(bp): 44873177 End Site(bp): 45112602 Gene Summary: This gene is located on the X chromosome and is the corresponding locus to a Y-linked gene which encodes a tetratricopeptide repeat (TPR) protein. The encoded protein of this gene contains a JmjC-domain and catalyzes the demethylation of tri/dimethylated histone H3. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Apr 2014] External Links: Ensembl ID: ENSG00000147050 HGNC ID: HGNC:12637 Entrez Gene: 7403

Expression Profile of KDM6A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-107 YES YES NO hsa-miR-1297 YES NO YES hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-300 YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-455-5p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-758-3p YES YES YES hsa-miR-93-5p YES YES NO Display: