ctcRbase

Entry Detail

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General Information

Database ID: BRCA18671 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SLC4A4 Full Name: solute carrier family 4 member 4 Category: mRNA Synonyms: HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC Chromosome: chr4 Strand: + Coordinate: Start Site(bp): 71186757 End Site(bp): 71572087 Gene Summary: This gene encodes a sodium bicarbonate cotransporter (NBC) involved in the regulation of bicarbonate secretion and absorption and intracellular pH. Mutations in this gene are associated with proximal renal tubular acidosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008] External Links: Ensembl ID: ENSG00000080493 HGNC ID: HGNC:11030 Entrez Gene: 8671

Expression Profile of SLC4A4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-101-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-224-5p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-300 YES NO NO hsa-miR-370-3p YES YES YES hsa-miR-379-5p YES YES NO hsa-miR-381-3p YES NO NO hsa-miR-448 YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-876-5p YES YES NO hsa-miR-98-5p YES YES YES Display: