ctcRbase

Entry Detail

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General Information

Database ID: BRCA19333 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: HTD2 Full Name: hydroxyacyl-thioester dehydratase type 2 Category: mRNA Synonyms: - Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 58306262 End Site(bp): 58318574 Gene Summary: This gene encodes a protein that localizes to the mitochondria and can function as a 3-hydroxyacyl thioester dehydratase. This gene is located just downstream of the gene for ribonuclease P/MRP subunit p14 (RPP14) in a genomic context that is conserved among animals. The upstream RPP14 gene is thought to be co-transcribed with this gene, and bicistronic transcripts may include open reading frames for both proteins. [provided by RefSeq, May 2017] External Links: Ensembl ID: ENSG00000255154 HGNC ID: HGNC:53111 Entrez Gene: 109703458

Expression Profile of HTD2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-328-3p YES YES YES hsa-miR-331-3p YES NO YES hsa-miR-340-5p YES YES YES hsa-miR-384 YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-425-5p YES YES YES hsa-miR-448 YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-9-5p YES YES NO Display: